diff --git a/app/assets/javascripts/app/controllers/_integration/ldap.coffee b/app/assets/javascripts/app/controllers/_integration/ldap.coffee
index 282d2785c..dc0bbbdef 100644
--- a/app/assets/javascripts/app/controllers/_integration/ldap.coffee
+++ b/app/assets/javascripts/app/controllers/_integration/ldap.coffee
@@ -124,7 +124,7 @@ class Form extends App.Controller
     if _.isEmpty(job)
       @lastImport.html('')
       return
-    countDone = job.result.created + job.result.updated + job.result.unchanged + job.result.skipped + job.result.failed + job.result.deactivated
+    countDone = job.result.created + job.result.updated + job.result.unchanged + job.result.skipped + job.result.failed
     if !job.result.roles
       job.result.roles = {}
     for role_id, statistic of job.result.role_ids
@@ -545,8 +545,6 @@ class ConnectionWizard extends App.WizardModal
             total += job.result.unchanged
           if job.result.updated
             total += job.result.updated
-          if job.result.deactivated
-            total += job.result.deactivated
           @$('.js-progress progress').attr('value', total)
           @$('.js-progress progress').attr('max', job.result.sum)
         if job.finished_at
@@ -568,7 +566,7 @@ class ConnectionWizard extends App.WizardModal
     for role_id, statistic of job.result.role_ids
       role = App.Role.find(role_id)
       job.result.roles[role.displayName()] = statistic
-    countDone = job.result.created + job.result.updated + job.result.unchanged + job.result.skipped + job.result.deactivated
+    countDone = job.result.created + job.result.updated + job.result.unchanged + job.result.skipped
     @showSlide('js-try')
     el = $(App.view('integration/ldap_summary')(job: job, countDone: countDone))
     @el.find('.js-summary').html(el)
diff --git a/lib/import/ldap/user.rb b/lib/import/ldap/user.rb
index a474be240..19eaba32f 100644
--- a/lib/import/ldap/user.rb
+++ b/lib/import/ldap/user.rb
@@ -6,7 +6,7 @@ module Import
         @remote_id
       end
 
-      def self.lost_ids(found_remote_ids)
+      def self.lost_map(found_remote_ids)
         ExternalSync.joins('INNER JOIN users ON (users.id = external_syncs.o_id)')
                     .where(
                       source: source,
@@ -18,7 +18,6 @@ module Import
                     .pluck(:source_id, :o_id)
                     .to_h
                     .except(*found_remote_ids)
-                    .values
       end
 
       def self.deactivate_lost(lost_ids)
diff --git a/lib/import/ldap/user_factory.rb b/lib/import/ldap/user_factory.rb
index 49a4b3c02..3ed6f40ee 100644
--- a/lib/import/ldap/user_factory.rb
+++ b/lib/import/ldap/user_factory.rb
@@ -33,7 +33,8 @@ module Import
         relevant_attributes = config[:user_attributes].keys
         relevant_attributes.push('dn')
 
-        @found_remote_ids = []
+        @found_lost_remote_ids = []
+        @found_remote_ids      = []
         @ldap.search(config[:user_filter], attributes: relevant_attributes) do |entry|
           backend_instance = create_instance(entry, config, user_roles, signup_role_ids, kargs)
           post_import_hook(entry, backend_instance, config, user_roles, signup_role_ids, kargs)
@@ -122,23 +123,32 @@ module Import
       end
 
       def self.track_found_remote_ids(backend_instance)
+        remote_id = backend_instance.remote_id(nil)
         @deactivation_actions ||= %i(skipped failed)
-        return if @deactivation_actions.include?(backend_instance.action)
-
-        @found_remote_ids.push(backend_instance.remote_id(nil))
+        if @deactivation_actions.include?(backend_instance.action)
+          @found_lost_remote_ids.push(remote_id)
+        else
+          @found_remote_ids.push(remote_id)
+        end
       end
 
       def self.handle_lost
         backend_class = backend_class(nil)
-        lost_ids      = backend_class.lost_ids(@found_remote_ids)
+        lost_map      = backend_class.lost_map(@found_remote_ids)
 
-        # track disabled count and substract it from
-        # skipped where they are logged till now
-        @statistics[:deactivated] = lost_ids.size
-        @statistics[:skipped]    -= lost_ids.size
+        # disabled count is tracked as a separate number
+        # since they don't have to be in the sum (e.g. deleted in LDAP)
+        @statistics[:deactivated] = lost_map.size
+
+        # skipped deactivated are those who
+        # were found, skipped and will get deactivated
+        skipped_deactivated    = @found_lost_remote_ids & lost_map.keys
+        @statistics[:skipped] -= skipped_deactivated.size
 
         # loop over every lost user ID and add the
         # deactivated count to the statistics
+        lost_ids = lost_map.values
+
         lost_ids.each do |user_id|
           role_ids = ::User.joins(:roles)
                            .where(id: user_id)